Cluster: HRGMv2_2128_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2128
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2128_1 | HRGMv2_2128_1_535 | 582040 | 583149 | - | GH172 |
| TC | HRGMv2_2128_1 | HRGMv2_2128_1_536 | 583191 | 584045 | - | 3.A.1.1.17 |
| TC | HRGMv2_2128_1 | HRGMv2_2128_1_537 | 584057 | 584935 | - | 3.A.1.1.41 |
| STP | HRGMv2_2128_1 | HRGMv2_2128_1_538 | 585014 | 586249 | - | SBP_bac_1 |
| TC | HRGMv2_2128_1 | HRGMv2_2128_1_539 | 586495 | 588321 | + | 8.A.59.2.1 |
Gene ID: HRGMv2_2128_1_535
Type: CAZyme
Location: 582040 - 583149 (-)
Type: CAZyme
Location: 582040 - 583149 (-)
Gene ID: HRGMv2_2128_1_536
Type: TC
Location: 583191 - 584045 (-)
Type: TC
Location: 583191 - 584045 (-)
Gene ID: HRGMv2_2128_1_537
Type: TC
Location: 584057 - 584935 (-)
Type: TC
Location: 584057 - 584935 (-)
Gene ID: HRGMv2_2128_1_538
Type: STP
Location: 585014 - 586249 (-)
Type: STP
Location: 585014 - 586249 (-)
Gene ID: HRGMv2_2128_1_539
Type: TC
Location: 586495 - 588321 (+)
Type: TC
Location: 586495 - 588321 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A sp900066335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2128_1_536 | vegan > omnivore | 1.11613 | 0.00191 |
| HRGMv2_2128_1_538 | vegan > omnivore | 1.47000 | 0.00191 |