Cluster: HRGMv2_2128_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2128
- CGC Family ID: CGCFAM_01000
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2128_1 | HRGMv2_2128_1_500 | 542157 | 544670 | - | GH3 |
| STP | HRGMv2_2128_1 | HRGMv2_2128_1_501 | 544673 | 544906 | - | PTS-HPr |
| CAZyme | HRGMv2_2128_1 | HRGMv2_2128_1_502 | 545077 | 546645 | - | GH78 |
| TC | HRGMv2_2128_1 | HRGMv2_2128_1_503 | 546645 | 548000 | - | 2.A.2.3.3 |
Gene ID: HRGMv2_2128_1_500
Type: CAZyme
Location: 542157 - 544670 (-)
Type: CAZyme
Location: 542157 - 544670 (-)
Gene ID: HRGMv2_2128_1_501
Type: STP
Location: 544673 - 544906 (-)
Type: STP
Location: 544673 - 544906 (-)
Gene ID: HRGMv2_2128_1_502
Type: CAZyme
Location: 545077 - 546645 (-)
Type: CAZyme
Location: 545077 - 546645 (-)
Gene ID: HRGMv2_2128_1_503
Type: TC
Location: 546645 - 548000 (-)
Type: TC
Location: 546645 - 548000 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A sp900066335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2128_1_500 | vegetarian > omnivore | 1.18139 | 0.02942 |
| HRGMv2_2128_1_501 | vegan > omnivore | 1.49420 | 0.00191 |
| HRGMv2_2128_1_501 | vegetarian > omnivore | 1.20289 | 0.02942 |
| HRGMv2_2128_1_502 | vegan > omnivore | 1.02798 | 0.00191 |