Cluster: HRGMv2_2119_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2119
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2119_2 | HRGMv2_2119_2_38 | 61132 | 62304 | + | GT4 |
| TF | HRGMv2_2119_2 | HRGMv2_2119_2_39 | 62563 | 62919 | + | GntR |
| TC | HRGMv2_2119_2 | HRGMv2_2119_2_40 | 62980 | 63666 | + | 3.A.1.132.6 |
Gene ID: HRGMv2_2119_2_38
Type: CAZyme
Location: 61132 - 62304 (+)
Type: CAZyme
Location: 61132 - 62304 (+)
Gene ID: HRGMv2_2119_2_39
Type: TF
Location: 62563 - 62919 (+)
Type: TF
Location: 62563 - 62919 (+)
Gene ID: HRGMv2_2119_2_40
Type: TC
Location: 62980 - 63666 (+)
Type: TC
Location: 62980 - 63666 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp934247115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.