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Cluster: HRGMv2_2119_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2119_1 HRGMv2_2119_1_236 273409 274479 - GH5_2
CAZyme HRGMv2_2119_1 HRGMv2_2119_1_237 274810 277257 - GT35
pfam HRGMv2_2119_1 HRGMv2_2119_1_238 277904 278704 - DnaJ | TPR_8
TC HRGMv2_2119_1 HRGMv2_2119_1_239 278708 279607 - 1.E.12.1.3
NULL(UNKNOWN) HRGMv2_2119_1 HRGMv2_2119_1_240 279661 280056 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2119_1 HRGMv2_2119_1_241 280106 281869 - 1.A.33.1.4
NULL(UNKNOWN) HRGMv2_2119_1 HRGMv2_2119_1_242 281811 281951 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2119_1 HRGMv2_2119_1_243 282160 283887 - 2.A.25.1.3
Gene ID: HRGMv2_2119_1_236
Type: CAZyme
Location: 273409 - 274479 (-)
Gene ID: HRGMv2_2119_1_237
Type: CAZyme
Location: 274810 - 277257 (-)
Gene ID: HRGMv2_2119_1_238
Type: pfam
Location: 277904 - 278704 (-)
Gene ID: HRGMv2_2119_1_239
Type: TC
Location: 278708 - 279607 (-)
Gene ID: HRGMv2_2119_1_240
Type:
Location: 279661 - 280056 (-)
Gene ID: HRGMv2_2119_1_241
Type: TC
Location: 280106 - 281869 (-)
Gene ID: HRGMv2_2119_1_242
Type:
Location: 281811 - 281951 (-)
Gene ID: HRGMv2_2119_1_243
Type: TC
Location: 282160 - 283887 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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