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Cluster: HRGMv2_2119_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2119_1 HRGMv2_2119_1_226 262039 263130 + 3.A.1.6.1
TC HRGMv2_2119_1 HRGMv2_2119_1_227 263193 264047 + 3.A.1.6.1
TC HRGMv2_2119_1 HRGMv2_2119_1_228 264062 264886 + 3.A.1.6.1
TC HRGMv2_2119_1 HRGMv2_2119_1_229 264888 266009 + 3.A.1.6.3
TF HRGMv2_2119_1 HRGMv2_2119_1_230 266191 267270 + LacI
NULL(UNKNOWN) HRGMv2_2119_1 HRGMv2_2119_1_231 267331 267957 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2119_1 HRGMv2_2119_1_232 268250 270733 + GH94
Gene ID: HRGMv2_2119_1_226
Type: TC
Location: 262039 - 263130 (+)
Gene ID: HRGMv2_2119_1_227
Type: TC
Location: 263193 - 264047 (+)
Gene ID: HRGMv2_2119_1_228
Type: TC
Location: 264062 - 264886 (+)
Gene ID: HRGMv2_2119_1_229
Type: TC
Location: 264888 - 266009 (+)
Gene ID: HRGMv2_2119_1_230
Type: TF
Location: 266191 - 267270 (+)
Gene ID: HRGMv2_2119_1_231
Type:
Location: 267331 - 267957 (-)
Gene ID: HRGMv2_2119_1_232
Type: CAZyme
Location: 268250 - 270733 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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