Cluster: HRGMv2_2119_CGC31
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2119
- CGC Family ID: CGCFAM_09341
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2119_50 | HRGMv2_2119_50_8 | 7945 | 9615 | + | GH43_35 |
| TC | HRGMv2_2119_50 | HRGMv2_2119_50_9 | 9640 | 10968 | + | 2.A.35.1.5 |
| TC | HRGMv2_2119_50 | HRGMv2_2119_50_10 | 11135 | 12550 | + | 2.A.25.1.4 |
| TC | HRGMv2_2119_50 | HRGMv2_2119_50_11 | 12772 | 13194 | + | 5.A.1.6.1 |
Gene ID: HRGMv2_2119_50_8
Type: CAZyme
Location: 7945 - 9615 (+)
Type: CAZyme
Location: 7945 - 9615 (+)
Gene ID: HRGMv2_2119_50_9
Type: TC
Location: 9640 - 10968 (+)
Type: TC
Location: 9640 - 10968 (+)
Gene ID: HRGMv2_2119_50_10
Type: TC
Location: 11135 - 12550 (+)
Type: TC
Location: 11135 - 12550 (+)
Gene ID: HRGMv2_2119_50_11
Type: TC
Location: 12772 - 13194 (+)
Type: TC
Location: 12772 - 13194 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp934247115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.