Cluster: HRGMv2_2119_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2119
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2119_1 | HRGMv2_2119_1_143 | 169071 | 170198 | - | GH53 |
| NULL(UNKNOWN) | HRGMv2_2119_1 | HRGMv2_2119_1_144 | 170362 | 170574 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2119_1 | HRGMv2_2119_1_145 | 170547 | 172388 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2119_1 | HRGMv2_2119_1_146 | 172815 | 173657 | - | 3.A.1.1.27 |
| TC | HRGMv2_2119_1 | HRGMv2_2119_1_147 | 173657 | 175093 | - | 3.A.1.1.27 |
Gene ID: HRGMv2_2119_1_143
Type: CAZyme
Location: 169071 - 170198 (-)
Type: CAZyme
Location: 169071 - 170198 (-)
Gene ID: HRGMv2_2119_1_144
Type:
Location: 170362 - 170574 (-)
Type:
Location: 170362 - 170574 (-)
Gene ID: HRGMv2_2119_1_145
Type:
Location: 170547 - 172388 (-)
Type:
Location: 170547 - 172388 (-)
Gene ID: HRGMv2_2119_1_146
Type: TC
Location: 172815 - 173657 (-)
Type: TC
Location: 172815 - 173657 (-)
Gene ID: HRGMv2_2119_1_147
Type: TC
Location: 173657 - 175093 (-)
Type: TC
Location: 173657 - 175093 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp934247115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.