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Cluster: HRGMv2_2119_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2119_8 HRGMv2_2119_8_11 9204 9374 - 1.E.52.1.1
pfam HRGMv2_2119_8 HRGMv2_2119_8_12 9389 10702 - aBig_2
NULL(UNKNOWN) HRGMv2_2119_8 HRGMv2_2119_8_13 10714 11454 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2119_8 HRGMv2_2119_8_14 11459 12712 - 9.A.47.2.1
NULL(UNKNOWN) HRGMv2_2119_8 HRGMv2_2119_8_15 12709 13608 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2119_8 HRGMv2_2119_8_16 13693 14265 - 1.A.54.5.1
NULL(UNKNOWN) HRGMv2_2119_8 HRGMv2_2119_8_17 14477 14785 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2119_8 HRGMv2_2119_8_18 14923 16668 - 2.A.21.9.2
pfam HRGMv2_2119_8 HRGMv2_2119_8_19 16811 20077 - GtrA_DPMS_TM | YfhO
CAZyme HRGMv2_2119_8 HRGMv2_2119_8_20 20220 22496 - CBM4 | GH9
pfam HRGMv2_2119_8 HRGMv2_2119_8_21 22498 23274 - His_biosynth
TC HRGMv2_2119_8 HRGMv2_2119_8_22 23500 24912 + 3.A.24.3.1
TC HRGMv2_2119_8 HRGMv2_2119_8_23 25054 25677 - 3.A.11.1.4
TC HRGMv2_2119_8 HRGMv2_2119_8_24 25834 28182 - 3.A.7.16.1
TC HRGMv2_2119_8 HRGMv2_2119_8_25 28219 29211 - 9.B.157.1.1
Gene ID: HRGMv2_2119_8_11
Type: TC
Location: 9204 - 9374 (-)
Gene ID: HRGMv2_2119_8_12
Type: pfam
Location: 9389 - 10702 (-)
Gene ID: HRGMv2_2119_8_13
Type:
Location: 10714 - 11454 (-)
Gene ID: HRGMv2_2119_8_14
Type: TC
Location: 11459 - 12712 (-)
Gene ID: HRGMv2_2119_8_15
Type:
Location: 12709 - 13608 (-)
Gene ID: HRGMv2_2119_8_16
Type: TC
Location: 13693 - 14265 (-)
Gene ID: HRGMv2_2119_8_17
Type:
Location: 14477 - 14785 (-)
Gene ID: HRGMv2_2119_8_18
Type: TC
Location: 14923 - 16668 (-)
Gene ID: HRGMv2_2119_8_19
Type: pfam
Location: 16811 - 20077 (-)
Gene ID: HRGMv2_2119_8_20
Type: CAZyme
Location: 20220 - 22496 (-)
Gene ID: HRGMv2_2119_8_21
Type: pfam
Location: 22498 - 23274 (-)
Gene ID: HRGMv2_2119_8_22
Type: TC
Location: 23500 - 24912 (+)
Gene ID: HRGMv2_2119_8_23
Type: TC
Location: 25054 - 25677 (-)
Gene ID: HRGMv2_2119_8_24
Type: TC
Location: 25834 - 28182 (-)
Gene ID: HRGMv2_2119_8_25
Type: TC
Location: 28219 - 29211 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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