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Cluster: HRGMv2_2119_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2119_5 HRGMv2_2119_5_100 106098 109874 + GH77 | GT35
TF HRGMv2_2119_5 HRGMv2_2119_5_101 110079 111596 + HTH_AraC
TC HRGMv2_2119_5 HRGMv2_2119_5_102 111655 113367 + 8.A.59.2.1
STP HRGMv2_2119_5 HRGMv2_2119_5_103 113666 114967 + SBP_bac_1
TC HRGMv2_2119_5 HRGMv2_2119_5_104 115074 116468 + 3.A.1.1.27
TC HRGMv2_2119_5 HRGMv2_2119_5_105 116468 117343 + 3.A.1.1.27
TC HRGMv2_2119_5 HRGMv2_2119_5_106 117394 119091 + 3.A.1.1.9
Gene ID: HRGMv2_2119_5_100
Type: CAZyme
Location: 106098 - 109874 (+)
Gene ID: HRGMv2_2119_5_101
Type: TF
Location: 110079 - 111596 (+)
Gene ID: HRGMv2_2119_5_102
Type: TC
Location: 111655 - 113367 (+)
Gene ID: HRGMv2_2119_5_103
Type: STP
Location: 113666 - 114967 (+)
Gene ID: HRGMv2_2119_5_104
Type: TC
Location: 115074 - 116468 (+)
Gene ID: HRGMv2_2119_5_105
Type: TC
Location: 116468 - 117343 (+)
Gene ID: HRGMv2_2119_5_106
Type: TC
Location: 117394 - 119091 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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