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Cluster: HRGMv2_2119_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2119_5 HRGMv2_2119_5_89 90682 92100 + 2.A.66.1.32
STP HRGMv2_2119_5 HRGMv2_2119_5_90 92115 93605 + AAA
TF HRGMv2_2119_5 HRGMv2_2119_5_91 93717 94748 + LacI
TC HRGMv2_2119_5 HRGMv2_2119_5_92 95162 96640 + 3.A.1.1.45
TC HRGMv2_2119_5 HRGMv2_2119_5_93 96747 97643 + 3.A.1.1.45
TC HRGMv2_2119_5 HRGMv2_2119_5_94 97643 98479 + 3.A.1.1.45
CAZyme HRGMv2_2119_5 HRGMv2_2119_5_95 98489 100186 + GH13_31
CAZyme HRGMv2_2119_5 HRGMv2_2119_5_96 100698 103022 + GH36
Gene ID: HRGMv2_2119_5_89
Type: TC
Location: 90682 - 92100 (+)
Gene ID: HRGMv2_2119_5_90
Type: STP
Location: 92115 - 93605 (+)
Gene ID: HRGMv2_2119_5_91
Type: TF
Location: 93717 - 94748 (+)
Gene ID: HRGMv2_2119_5_92
Type: TC
Location: 95162 - 96640 (+)
Gene ID: HRGMv2_2119_5_93
Type: TC
Location: 96747 - 97643 (+)
Gene ID: HRGMv2_2119_5_94
Type: TC
Location: 97643 - 98479 (+)
Gene ID: HRGMv2_2119_5_95
Type: CAZyme
Location: 98489 - 100186 (+)
Gene ID: HRGMv2_2119_5_96
Type: CAZyme
Location: 100698 - 103022 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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