Cluster: HRGMv2_2119_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2119
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2119_3 | HRGMv2_2119_3_1 | 1 | 2124 | + | GH94 |
| peptidase | HRGMv2_2119_3 | HRGMv2_2119_3_2 | 2247 | 2906 | + | S14.UPW |
| pfam | HRGMv2_2119_3 | HRGMv2_2119_3_3 | 2967 | 3845 | + | BacA |
| TC | HRGMv2_2119_3 | HRGMv2_2119_3_4 | 3866 | 6829 | + | 3.A.12.1.1 |
Gene ID: HRGMv2_2119_3_1
Type: CAZyme
Location: 1 - 2124 (+)
Type: CAZyme
Location: 1 - 2124 (+)
Gene ID: HRGMv2_2119_3_2
Type: peptidase
Location: 2247 - 2906 (+)
Type: peptidase
Location: 2247 - 2906 (+)
Gene ID: HRGMv2_2119_3_3
Type: pfam
Location: 2967 - 3845 (+)
Type: pfam
Location: 2967 - 3845 (+)
Gene ID: HRGMv2_2119_3_4
Type: TC
Location: 3866 - 6829 (+)
Type: TC
Location: 3866 - 6829 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp934247115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.