Cluster: HRGMv2_2119_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2119
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2119_2 | HRGMv2_2119_2_70 | 96408 | 98396 | + | GH31_1 |
| pfam | HRGMv2_2119_2 | HRGMv2_2119_2_71 | 98409 | 99209 | + | S6PP | Hydrolase_3 |
| TC | HRGMv2_2119_2 | HRGMv2_2119_2_72 | 99437 | 100135 | + | 3.A.1.122.14 |
Gene ID: HRGMv2_2119_2_70
Type: CAZyme
Location: 96408 - 98396 (+)
Type: CAZyme
Location: 96408 - 98396 (+)
Gene ID: HRGMv2_2119_2_71
Type: pfam
Location: 98409 - 99209 (+)
Type: pfam
Location: 98409 - 99209 (+)
Gene ID: HRGMv2_2119_2_72
Type: TC
Location: 99437 - 100135 (+)
Type: TC
Location: 99437 - 100135 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp934247115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.