Cluster: HRGMv2_2119_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2119
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2119_2 | HRGMv2_2119_2_55 | 76178 | 78295 | - | 9.B.74.1.1 |
| NULL(UNKNOWN) | HRGMv2_2119_2 | HRGMv2_2119_2_56 | 78292 | 78888 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2119_2 | HRGMv2_2119_2_57 | 78901 | 81042 | - | 9.B.74.1.1 |
| pfam | HRGMv2_2119_2 | HRGMv2_2119_2_58 | 81130 | 82476 | - | Aldedh |
| CAZyme | HRGMv2_2119_2 | HRGMv2_2119_2_59 | 82718 | 84310 | - | GH13_44 |
| TC | HRGMv2_2119_2 | HRGMv2_2119_2_60 | 84898 | 86400 | + | 2.A.22.5.3 |
Gene ID: HRGMv2_2119_2_55
Type: TC
Location: 76178 - 78295 (-)
Type: TC
Location: 76178 - 78295 (-)
Gene ID: HRGMv2_2119_2_56
Type:
Location: 78292 - 78888 (-)
Type:
Location: 78292 - 78888 (-)
Gene ID: HRGMv2_2119_2_57
Type: TC
Location: 78901 - 81042 (-)
Type: TC
Location: 78901 - 81042 (-)
Gene ID: HRGMv2_2119_2_58
Type: pfam
Location: 81130 - 82476 (-)
Type: pfam
Location: 81130 - 82476 (-)
Gene ID: HRGMv2_2119_2_59
Type: CAZyme
Location: 82718 - 84310 (-)
Type: CAZyme
Location: 82718 - 84310 (-)
Gene ID: HRGMv2_2119_2_60
Type: TC
Location: 84898 - 86400 (+)
Type: TC
Location: 84898 - 86400 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp934247115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.