Cluster: HRGMv2_2119_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2119
- CGC Family ID: CGCFAM_00105
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2119_1 | HRGMv2_2119_1_82 | 91039 | 92871 | - | GT2 |
| TC | HRGMv2_2119_1 | HRGMv2_2119_1_83 | 92919 | 93785 | - | 3.A.1.103.5 |
| TC | HRGMv2_2119_1 | HRGMv2_2119_1_84 | 93798 | 94586 | - | 3.A.1.103.4 |
| CAZyme | HRGMv2_2119_1 | HRGMv2_2119_1_85 | 94612 | 95643 | - | GT2 |
| CAZyme | HRGMv2_2119_1 | HRGMv2_2119_1_86 | 95646 | 96425 | - | GT2 |
Gene ID: HRGMv2_2119_1_82
Type: CAZyme
Location: 91039 - 92871 (-)
Type: CAZyme
Location: 91039 - 92871 (-)
Gene ID: HRGMv2_2119_1_83
Type: TC
Location: 92919 - 93785 (-)
Type: TC
Location: 92919 - 93785 (-)
Gene ID: HRGMv2_2119_1_84
Type: TC
Location: 93798 - 94586 (-)
Type: TC
Location: 93798 - 94586 (-)
Gene ID: HRGMv2_2119_1_85
Type: CAZyme
Location: 94612 - 95643 (-)
Type: CAZyme
Location: 94612 - 95643 (-)
Gene ID: HRGMv2_2119_1_86
Type: CAZyme
Location: 95646 - 96425 (-)
Type: CAZyme
Location: 95646 - 96425 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp934247115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.