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Cluster: HRGMv2_2117_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2117_15 HRGMv2_2117_15_18 17078 17701 + 9.A.11.1.1
TC HRGMv2_2117_15 HRGMv2_2117_15_19 17691 18107 + 9.A.11.1.1
TC HRGMv2_2117_15 HRGMv2_2117_15_20 18213 18662 + 9.A.11.1.1
pfam HRGMv2_2117_15 HRGMv2_2117_15_21 18781 19158 + DUF3783
pfam HRGMv2_2117_15 HRGMv2_2117_15_22 19179 21065 + VanW
TC HRGMv2_2117_15 HRGMv2_2117_15_23 21237 22589 - 2.A.49.9.2
TC HRGMv2_2117_15 HRGMv2_2117_15_24 22835 23863 + 9.A.11.1.1
pfam HRGMv2_2117_15 HRGMv2_2117_15_25 23865 24221 + SpoVAC_SpoVAEB
CAZyme HRGMv2_2117_15 HRGMv2_2117_15_26 24306 27137 - GT51
Gene ID: HRGMv2_2117_15_18
Type: TC
Location: 17078 - 17701 (+)
Gene ID: HRGMv2_2117_15_19
Type: TC
Location: 17691 - 18107 (+)
Gene ID: HRGMv2_2117_15_20
Type: TC
Location: 18213 - 18662 (+)
Gene ID: HRGMv2_2117_15_21
Type: pfam
Location: 18781 - 19158 (+)
Gene ID: HRGMv2_2117_15_22
Type: pfam
Location: 19179 - 21065 (+)
Gene ID: HRGMv2_2117_15_23
Type: TC
Location: 21237 - 22589 (-)
Gene ID: HRGMv2_2117_15_24
Type: TC
Location: 22835 - 23863 (+)
Gene ID: HRGMv2_2117_15_25
Type: pfam
Location: 23865 - 24221 (+)
Gene ID: HRGMv2_2117_15_26
Type: CAZyme
Location: 24306 - 27137 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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