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Cluster: HRGMv2_2117_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2117_10 HRGMv2_2117_10_3 3979 4971 + 9.B.157.1.1
TC HRGMv2_2117_10 HRGMv2_2117_10_4 5050 7446 + 3.A.7.16.1
TC HRGMv2_2117_10 HRGMv2_2117_10_5 7731 8441 + 3.A.11.1.4
TC HRGMv2_2117_10 HRGMv2_2117_10_6 8438 9079 - 9.B.28.1.3
TC HRGMv2_2117_10 HRGMv2_2117_10_7 9115 10524 - 3.A.24.3.1
pfam HRGMv2_2117_10 HRGMv2_2117_10_8 10800 11576 + His_biosynth
CAZyme HRGMv2_2117_10 HRGMv2_2117_10_9 11578 13851 + CBM4 | GH9
pfam HRGMv2_2117_10 HRGMv2_2117_10_10 14036 17260 + GtrA_DPMS_TM | YfhO
TC HRGMv2_2117_10 HRGMv2_2117_10_11 17477 19222 + 2.A.21.9.2
Gene ID: HRGMv2_2117_10_3
Type: TC
Location: 3979 - 4971 (+)
Gene ID: HRGMv2_2117_10_4
Type: TC
Location: 5050 - 7446 (+)
Gene ID: HRGMv2_2117_10_5
Type: TC
Location: 7731 - 8441 (+)
Gene ID: HRGMv2_2117_10_6
Type: TC
Location: 8438 - 9079 (-)
Gene ID: HRGMv2_2117_10_7
Type: TC
Location: 9115 - 10524 (-)
Gene ID: HRGMv2_2117_10_8
Type: pfam
Location: 10800 - 11576 (+)
Gene ID: HRGMv2_2117_10_9
Type: CAZyme
Location: 11578 - 13851 (+)
Gene ID: HRGMv2_2117_10_10
Type: pfam
Location: 14036 - 17260 (+)
Gene ID: HRGMv2_2117_10_11
Type: TC
Location: 17477 - 19222 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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