Cluster: HRGMv2_2117_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2117
- CGC Family ID: CGCFAM_03955
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2117_7 | HRGMv2_2117_7_11 | 28766 | 30562 | - | GH13_20 |
| TC | HRGMv2_2117_7 | HRGMv2_2117_7_12 | 30751 | 31071 | + | 2.A.40.2.1 |
| TC | HRGMv2_2117_7 | HRGMv2_2117_7_13 | 31344 | 32117 | + | 3.A.1.134.12 |
Gene ID: HRGMv2_2117_7_11
Type: CAZyme
Location: 28766 - 30562 (-)
Type: CAZyme
Location: 28766 - 30562 (-)
Gene ID: HRGMv2_2117_7_12
Type: TC
Location: 30751 - 31071 (+)
Type: TC
Location: 30751 - 31071 (+)
Gene ID: HRGMv2_2117_7_13
Type: TC
Location: 31344 - 32117 (+)
Type: TC
Location: 31344 - 32117 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900557435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.