Cluster: HRGMv2_2117_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2117
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2117_119 | HRGMv2_2117_119_2 | 2488 | 3615 | - | GH53 |
| NULL(UNKNOWN) | HRGMv2_2117_119 | HRGMv2_2117_119_3 | 3779 | 3991 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2117_119 | HRGMv2_2117_119_4 | 3964 | 5805 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2117_119 | HRGMv2_2117_119_5 | 6016 | 6858 | - | 3.A.1.1.27 |
| TC | HRGMv2_2117_119 | HRGMv2_2117_119_6 | 6858 | 8294 | - | 3.A.1.1.27 |
Gene ID: HRGMv2_2117_119_2
Type: CAZyme
Location: 2488 - 3615 (-)
Type: CAZyme
Location: 2488 - 3615 (-)
Gene ID: HRGMv2_2117_119_3
Type:
Location: 3779 - 3991 (-)
Type:
Location: 3779 - 3991 (-)
Gene ID: HRGMv2_2117_119_4
Type:
Location: 3964 - 5805 (-)
Type:
Location: 3964 - 5805 (-)
Gene ID: HRGMv2_2117_119_5
Type: TC
Location: 6016 - 6858 (-)
Type: TC
Location: 6016 - 6858 (-)
Gene ID: HRGMv2_2117_119_6
Type: TC
Location: 6858 - 8294 (-)
Type: TC
Location: 6858 - 8294 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900557435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.