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Cluster: HRGMv2_2117_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2117_104 HRGMv2_2117_104_1 2 457 - 9.B.28.1.2
STP HRGMv2_2117_104 HRGMv2_2117_104_2 878 2185 + SBP_bac_1
TC HRGMv2_2117_104 HRGMv2_2117_104_3 2303 3334 + 3.A.1.1.17
TC HRGMv2_2117_104 HRGMv2_2117_104_4 3350 4192 + 3.A.1.1.36
NULL(UNKNOWN) HRGMv2_2117_104 HRGMv2_2117_104_5 4440 5120 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2117_104 HRGMv2_2117_104_6 5294 7486 + GH36
TC HRGMv2_2117_104 HRGMv2_2117_104_7 8006 9409 - 2.A.66.1.33
Gene ID: HRGMv2_2117_104_1
Type: TC
Location: 2 - 457 (-)
Gene ID: HRGMv2_2117_104_2
Type: STP
Location: 878 - 2185 (+)
Gene ID: HRGMv2_2117_104_3
Type: TC
Location: 2303 - 3334 (+)
Gene ID: HRGMv2_2117_104_4
Type: TC
Location: 3350 - 4192 (+)
Gene ID: HRGMv2_2117_104_5
Type:
Location: 4440 - 5120 (+)
Gene ID: HRGMv2_2117_104_6
Type: CAZyme
Location: 5294 - 7486 (+)
Gene ID: HRGMv2_2117_104_7
Type: TC
Location: 8006 - 9409 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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