Cluster: HRGMv2_2117_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2117
- CGC Family ID: CGCFAM_00202
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2117_91 | HRGMv2_2117_91_10 | 9074 | 9760 | - | 3.A.1.132.6 |
| TF | HRGMv2_2117_91 | HRGMv2_2117_91_11 | 9859 | 10215 | - | GntR |
| CAZyme | HRGMv2_2117_91 | HRGMv2_2117_91_12 | 11202 | 12374 | - | GT4 |
Gene ID: HRGMv2_2117_91_10
Type: TC
Location: 9074 - 9760 (-)
Type: TC
Location: 9074 - 9760 (-)
Gene ID: HRGMv2_2117_91_11
Type: TF
Location: 9859 - 10215 (-)
Type: TF
Location: 9859 - 10215 (-)
Gene ID: HRGMv2_2117_91_12
Type: CAZyme
Location: 11202 - 12374 (-)
Type: CAZyme
Location: 11202 - 12374 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900557435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.