Cluster: HRGMv2_2117_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2117
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2117_75 | HRGMv2_2117_75_4 | 3155 | 5557 | + | GH94 |
| peptidase | HRGMv2_2117_75 | HRGMv2_2117_75_5 | 5680 | 6393 | + | S14.UPW |
| TC | HRGMv2_2117_75 | HRGMv2_2117_75_6 | 6430 | 9477 | + | 3.A.12.1.1 |
Gene ID: HRGMv2_2117_75_4
Type: CAZyme
Location: 3155 - 5557 (+)
Type: CAZyme
Location: 3155 - 5557 (+)
Gene ID: HRGMv2_2117_75_5
Type: peptidase
Location: 5680 - 6393 (+)
Type: peptidase
Location: 5680 - 6393 (+)
Gene ID: HRGMv2_2117_75_6
Type: TC
Location: 6430 - 9477 (+)
Type: TC
Location: 6430 - 9477 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900557435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.