Cluster: HRGMv2_2117_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2117
- CGC Family ID: CGCFAM_00269
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2117_65 | HRGMv2_2117_65_1 | 139 | 1851 | - | 8.A.59.2.1 |
| TF | HRGMv2_2117_65 | HRGMv2_2117_65_2 | 1910 | 3427 | - | HTH_AraC |
| CAZyme | HRGMv2_2117_65 | HRGMv2_2117_65_3 | 3808 | 7641 | - | GH77 | GT35 |
Gene ID: HRGMv2_2117_65_1
Type: TC
Location: 139 - 1851 (-)
Type: TC
Location: 139 - 1851 (-)
Gene ID: HRGMv2_2117_65_2
Type: TF
Location: 1910 - 3427 (-)
Type: TF
Location: 1910 - 3427 (-)
Gene ID: HRGMv2_2117_65_3
Type: CAZyme
Location: 3808 - 7641 (-)
Type: CAZyme
Location: 3808 - 7641 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900557435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.