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Cluster: HRGMv2_2117_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2117_31 HRGMv2_2117_31_2 1052 1912 - 3.A.1.1.26
TC HRGMv2_2117_31 HRGMv2_2117_31_3 1922 2881 - 3.A.1.1.4
NULL(UNKNOWN) HRGMv2_2117_31 HRGMv2_2117_31_4 3000 4451 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2117_31 HRGMv2_2117_31_5 4990 5883 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2117_31 HRGMv2_2117_31_6 5980 7605 - 3.A.1.121.4
NULL(UNKNOWN) HRGMv2_2117_31 HRGMv2_2117_31_7 7780 7965 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2117_31 HRGMv2_2117_31_8 8166 9449 + 9.A.40.2.4
TF HRGMv2_2117_31 HRGMv2_2117_31_9 9695 10426 + 0042546
TF HRGMv2_2117_31 HRGMv2_2117_31_10 10566 10895 - Trp_repressor
CAZyme HRGMv2_2117_31 HRGMv2_2117_31_11 10962 12461 - GH13_5
Gene ID: HRGMv2_2117_31_2
Type: TC
Location: 1052 - 1912 (-)
Gene ID: HRGMv2_2117_31_3
Type: TC
Location: 1922 - 2881 (-)
Gene ID: HRGMv2_2117_31_4
Type:
Location: 3000 - 4451 (-)
Gene ID: HRGMv2_2117_31_5
Type:
Location: 4990 - 5883 (+)
Gene ID: HRGMv2_2117_31_6
Type: TC
Location: 5980 - 7605 (-)
Gene ID: HRGMv2_2117_31_7
Type:
Location: 7780 - 7965 (-)
Gene ID: HRGMv2_2117_31_8
Type: TC
Location: 8166 - 9449 (+)
Gene ID: HRGMv2_2117_31_9
Type: TF
Location: 9695 - 10426 (+)
Gene ID: HRGMv2_2117_31_10
Type: TF
Location: 10566 - 10895 (-)
Gene ID: HRGMv2_2117_31_11
Type: CAZyme
Location: 10962 - 12461 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2117_31_2 vegan > omnivore 1.43753 0.03708
HRGMv2_2117_31_2 vegetarian > omnivore 1.01250 0.01285
HRGMv2_2117_31_4 vegan > omnivore 1.02506 0.03708
HRGMv2_2117_31_10 vegan > omnivore 1.37479 0.03708

🧭 Explore Read Mapping of CGC

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