Cluster: HRGMv2_2117_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2117
- CGC Family ID: CGCFAM_09962
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2117_24 | HRGMv2_2117_24_5 | 3385 | 6987 | + | GH2 |
| NULL(UNKNOWN) | HRGMv2_2117_24 | HRGMv2_2117_24_6 | 7009 | 7176 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2117_24 | HRGMv2_2117_24_7 | 7502 | 8953 | - | 2.A.3.3.19 |
Gene ID: HRGMv2_2117_24_5
Type: CAZyme
Location: 3385 - 6987 (+)
Type: CAZyme
Location: 3385 - 6987 (+)
Gene ID: HRGMv2_2117_24_6
Type:
Location: 7009 - 7176 (+)
Type:
Location: 7009 - 7176 (+)
Gene ID: HRGMv2_2117_24_7
Type: TC
Location: 7502 - 8953 (-)
Type: TC
Location: 7502 - 8953 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900557435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.