Cluster: HRGMv2_2109_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2109
- CGC Family ID: CGCFAM_00053
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2109_76 | HRGMv2_2109_76_5 | 4651 | 7656 | + | GT51 |
| pfam | HRGMv2_2109_76 | HRGMv2_2109_76_6 | 7826 | 8182 | - | SpoVAC_SpoVAEB |
| TC | HRGMv2_2109_76 | HRGMv2_2109_76_7 | 8189 | 9208 | - | 9.A.11.1.1 |
| TC | HRGMv2_2109_76 | HRGMv2_2109_76_8 | 9350 | 10657 | + | 2.A.49.9.2 |
Gene ID: HRGMv2_2109_76_5
Type: CAZyme
Location: 4651 - 7656 (+)
Type: CAZyme
Location: 4651 - 7656 (+)
Gene ID: HRGMv2_2109_76_6
Type: pfam
Location: 7826 - 8182 (-)
Type: pfam
Location: 7826 - 8182 (-)
Gene ID: HRGMv2_2109_76_7
Type: TC
Location: 8189 - 9208 (-)
Type: TC
Location: 8189 - 9208 (-)
Gene ID: HRGMv2_2109_76_8
Type: TC
Location: 9350 - 10657 (+)
Type: TC
Location: 9350 - 10657 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.