Cluster: HRGMv2_2099_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2099
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2099_18 | HRGMv2_2099_18_8 | 10375 | 11679 | + | GH1 |
| NULL(UNKNOWN) | HRGMv2_2099_18 | HRGMv2_2099_18_9 | 11697 | 11936 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_2099_18 | HRGMv2_2099_18_10 | 11956 | 13161 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2099_18 | HRGMv2_2099_18_11 | 13405 | 14880 | + | 2.A.2.3.5 |
| CAZyme | HRGMv2_2099_18 | HRGMv2_2099_18_12 | 14886 | 17093 | + | GH2 |
Gene ID: HRGMv2_2099_18_8
Type: CAZyme
Location: 10375 - 11679 (+)
Type: CAZyme
Location: 10375 - 11679 (+)
Gene ID: HRGMv2_2099_18_9
Type:
Location: 11697 - 11936 (+)
Type:
Location: 11697 - 11936 (+)
Gene ID: HRGMv2_2099_18_10
Type: TF
Location: 11956 - 13161 (+)
Type: TF
Location: 11956 - 13161 (+)
Gene ID: HRGMv2_2099_18_11
Type: TC
Location: 13405 - 14880 (+)
Type: TC
Location: 13405 - 14880 (+)
Gene ID: HRGMv2_2099_18_12
Type: CAZyme
Location: 14886 - 17093 (+)
Type: CAZyme
Location: 14886 - 17093 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp934435195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.