Cluster: HRGMv2_2099_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2099
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2099_18 | HRGMv2_2099_18_1 | 134 | 1858 | + | 3.A.1.106.2 |
| CAZyme | HRGMv2_2099_18 | HRGMv2_2099_18_2 | 2052 | 3890 | + | CBM32 | GH43_28 |
| CAZyme | HRGMv2_2099_18 | HRGMv2_2099_18_3 | 3910 | 6444 | + | CBM67 | GH78 |
Gene ID: HRGMv2_2099_18_1
Type: TC
Location: 134 - 1858 (+)
Type: TC
Location: 134 - 1858 (+)
Gene ID: HRGMv2_2099_18_2
Type: CAZyme
Location: 2052 - 3890 (+)
Type: CAZyme
Location: 2052 - 3890 (+)
Gene ID: HRGMv2_2099_18_3
Type: CAZyme
Location: 3910 - 6444 (+)
Type: CAZyme
Location: 3910 - 6444 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp934435195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.