Cluster: HRGMv2_2099_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2099
- CGC Family ID: CGCFAM_00093
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2099_9 | HRGMv2_2099_9_8 | 10016 | 12754 | - | CBM67 | GH78 |
| CAZyme | HRGMv2_2099_9 | HRGMv2_2099_9_9 | 12755 | 14251 | - | GH43_35 |
| TC | HRGMv2_2099_9 | HRGMv2_2099_9_10 | 14357 | 15745 | - | 2.A.2.3.5 |
| CAZyme | HRGMv2_2099_9 | HRGMv2_2099_9_11 | 15824 | 18118 | - | GH3 |
Gene ID: HRGMv2_2099_9_8
Type: CAZyme
Location: 10016 - 12754 (-)
Type: CAZyme
Location: 10016 - 12754 (-)
Gene ID: HRGMv2_2099_9_9
Type: CAZyme
Location: 12755 - 14251 (-)
Type: CAZyme
Location: 12755 - 14251 (-)
Gene ID: HRGMv2_2099_9_10
Type: TC
Location: 14357 - 15745 (-)
Type: TC
Location: 14357 - 15745 (-)
Gene ID: HRGMv2_2099_9_11
Type: CAZyme
Location: 15824 - 18118 (-)
Type: CAZyme
Location: 15824 - 18118 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp934435195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.