Cluster: HRGMv2_2099_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2099
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2099_141 | HRGMv2_2099_141_3 | 1645 | 2748 | - | GH179 |
| sulfatase | HRGMv2_2099_141 | HRGMv2_2099_141_4 | 2929 | 3762 | - | S1_62 |
| peptidase | HRGMv2_2099_141 | HRGMv2_2099_141_5 | 3990 | 5534 | - | S09.UPW |
| TC | HRGMv2_2099_141 | HRGMv2_2099_141_6 | 5548 | 6939 | - | 2.A.2.3.3 |
Gene ID: HRGMv2_2099_141_3
Type: CAZyme
Location: 1645 - 2748 (-)
Type: CAZyme
Location: 1645 - 2748 (-)
Gene ID: HRGMv2_2099_141_4
Type: sulfatase
Location: 2929 - 3762 (-)
Type: sulfatase
Location: 2929 - 3762 (-)
Gene ID: HRGMv2_2099_141_5
Type: peptidase
Location: 3990 - 5534 (-)
Type: peptidase
Location: 3990 - 5534 (-)
Gene ID: HRGMv2_2099_141_6
Type: TC
Location: 5548 - 6939 (-)
Type: TC
Location: 5548 - 6939 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp934435195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2099_141_3 | vegan > omnivore | 2.69110 | 0.00732 |
| HRGMv2_2099_141_3 | vegetarian > omnivore | 2.91383 | 0.00000 |