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Cluster: HRGMv2_2099_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2099_6 HRGMv2_2099_6_23 25531 27507 + 9.B.18.2.1
pfam HRGMv2_2099_6 HRGMv2_2099_6_24 27536 28051 + DegT_DnrJ_EryC1 | Cys_Met_Meta_PP
pfam HRGMv2_2099_6 HRGMv2_2099_6_25 28020 28739 + DegT_DnrJ_EryC1
TC HRGMv2_2099_6 HRGMv2_2099_6_26 28753 29448 + 9.B.18.1.3
CAZyme HRGMv2_2099_6 HRGMv2_2099_6_27 29450 30694 + GT4
CAZyme HRGMv2_2099_6 HRGMv2_2099_6_28 30728 31804 + GT2
pfam HRGMv2_2099_6 HRGMv2_2099_6_29 31827 33272 + Wzy_C
CAZyme HRGMv2_2099_6 HRGMv2_2099_6_30 33269 34384 + GT4
CAZyme HRGMv2_2099_6 HRGMv2_2099_6_31 34399 35397 + GT2
CAZyme HRGMv2_2099_6 HRGMv2_2099_6_32 35417 36418 + GT2
CAZyme HRGMv2_2099_6 HRGMv2_2099_6_33 36454 37392 + GT2
Gene ID: HRGMv2_2099_6_23
Type: TC
Location: 25531 - 27507 (+)
Gene ID: HRGMv2_2099_6_24
Type: pfam
Location: 27536 - 28051 (+)
Gene ID: HRGMv2_2099_6_25
Type: pfam
Location: 28020 - 28739 (+)
Gene ID: HRGMv2_2099_6_26
Type: TC
Location: 28753 - 29448 (+)
Gene ID: HRGMv2_2099_6_27
Type: CAZyme
Location: 29450 - 30694 (+)
Gene ID: HRGMv2_2099_6_28
Type: CAZyme
Location: 30728 - 31804 (+)
Gene ID: HRGMv2_2099_6_29
Type: pfam
Location: 31827 - 33272 (+)
Gene ID: HRGMv2_2099_6_30
Type: CAZyme
Location: 33269 - 34384 (+)
Gene ID: HRGMv2_2099_6_31
Type: CAZyme
Location: 34399 - 35397 (+)
Gene ID: HRGMv2_2099_6_32
Type: CAZyme
Location: 35417 - 36418 (+)
Gene ID: HRGMv2_2099_6_33
Type: CAZyme
Location: 36454 - 37392 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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