Cluster: HRGMv2_2099_CGC29
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2099
- CGC Family ID: CGCFAM_02392
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2099_139 | HRGMv2_2099_139_2 | 1426 | 2925 | + | 3.A.1.2.3 |
| TC | HRGMv2_2099_139 | HRGMv2_2099_139_3 | 2928 | 3953 | + | 3.A.1.2.1 |
| CAZyme | HRGMv2_2099_139 | HRGMv2_2099_139_4 | 3981 | 6326 | + | GH39 |
Gene ID: HRGMv2_2099_139_2
Type: TC
Location: 1426 - 2925 (+)
Type: TC
Location: 1426 - 2925 (+)
Gene ID: HRGMv2_2099_139_3
Type: TC
Location: 2928 - 3953 (+)
Type: TC
Location: 2928 - 3953 (+)
Gene ID: HRGMv2_2099_139_4
Type: CAZyme
Location: 3981 - 6326 (+)
Type: CAZyme
Location: 3981 - 6326 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp934435195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.