Cluster: HRGMv2_2099_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2099
- CGC Family ID: CGCFAM_00089
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2099_94 | HRGMv2_2099_94_3 | 1031 | 1579 | - | 3.A.1.25.5 |
| pfam | HRGMv2_2099_94 | HRGMv2_2099_94_4 | 1772 | 3928 | - | S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5 |
| CAZyme | HRGMv2_2099_94 | HRGMv2_2099_94_5 | 4081 | 5706 | - | CBM91 | GH43_11 |
| TC | HRGMv2_2099_94 | HRGMv2_2099_94_6 | 5812 | 6270 | - | 2.A.2.3.4 |
Gene ID: HRGMv2_2099_94_3
Type: TC
Location: 1031 - 1579 (-)
Type: TC
Location: 1031 - 1579 (-)
Gene ID: HRGMv2_2099_94_4
Type: pfam
Location: 1772 - 3928 (-)
Type: pfam
Location: 1772 - 3928 (-)
Gene ID: HRGMv2_2099_94_5
Type: CAZyme
Location: 4081 - 5706 (-)
Type: CAZyme
Location: 4081 - 5706 (-)
Gene ID: HRGMv2_2099_94_6
Type: TC
Location: 5812 - 6270 (-)
Type: TC
Location: 5812 - 6270 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp934435195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.