Cluster: HRGMv2_2099_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2099
- CGC Family ID: CGCFAM_00140
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2099_90 | HRGMv2_2099_90_1 | 3 | 1019 | - | 9.B.18.2.1 |
| pfam | HRGMv2_2099_90 | HRGMv2_2099_90_2 | 1074 | 2207 | - | EpsG |
| NULL(UNKNOWN) | HRGMv2_2099_90 | HRGMv2_2099_90_3 | 2209 | 3585 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2099_90 | HRGMv2_2099_90_4 | 3626 | 4582 | - | GT2 |
Gene ID: HRGMv2_2099_90_1
Type: TC
Location: 3 - 1019 (-)
Type: TC
Location: 3 - 1019 (-)
Gene ID: HRGMv2_2099_90_2
Type: pfam
Location: 1074 - 2207 (-)
Type: pfam
Location: 1074 - 2207 (-)
Gene ID: HRGMv2_2099_90_3
Type:
Location: 2209 - 3585 (-)
Type:
Location: 2209 - 3585 (-)
Gene ID: HRGMv2_2099_90_4
Type: CAZyme
Location: 3626 - 4582 (-)
Type: CAZyme
Location: 3626 - 4582 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp934435195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.