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Cluster: HRGMv2_2099_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2099_81 HRGMv2_2099_81_1 44 1441 - 2.A.22.5.3
STP HRGMv2_2099_81 HRGMv2_2099_81_2 1708 2280 + TetR_N
pfam HRGMv2_2099_81 HRGMv2_2099_81_3 2415 4421 + MCRA | NAD_binding_8
TC HRGMv2_2099_81 HRGMv2_2099_81_4 4517 5857 - 2.A.66.1.22
TC HRGMv2_2099_81 HRGMv2_2099_81_5 6036 7421 - 2.A.2.3.2
pfam HRGMv2_2099_81 HRGMv2_2099_81_6 7475 8446 - FMN_red
CAZyme HRGMv2_2099_81 HRGMv2_2099_81_7 8665 11061 - GH39
Gene ID: HRGMv2_2099_81_1
Type: TC
Location: 44 - 1441 (-)
Gene ID: HRGMv2_2099_81_2
Type: STP
Location: 1708 - 2280 (+)
Gene ID: HRGMv2_2099_81_3
Type: pfam
Location: 2415 - 4421 (+)
Gene ID: HRGMv2_2099_81_4
Type: TC
Location: 4517 - 5857 (-)
Gene ID: HRGMv2_2099_81_5
Type: TC
Location: 6036 - 7421 (-)
Gene ID: HRGMv2_2099_81_6
Type: pfam
Location: 7475 - 8446 (-)
Gene ID: HRGMv2_2099_81_7
Type: CAZyme
Location: 8665 - 11061 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2099_81_6 vegan > omnivore 1.16488 0.00732

🧭 Explore Read Mapping of CGC

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