Cluster: HRGMv2_2099_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2099
- CGC Family ID: CGCFAM_00040
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2099_67 | HRGMv2_2099_67_8 | 7494 | 8618 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_2099_67 | HRGMv2_2099_67_9 | 8725 | 8973 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2099_67 | HRGMv2_2099_67_10 | 9022 | 10005 | + | GT2 |
| pfam | HRGMv2_2099_67 | HRGMv2_2099_67_11 | 10018 | 11457 | + | O-ag_pol_Wzy |
| CAZyme | HRGMv2_2099_67 | HRGMv2_2099_67_12 | 11423 | 12406 | + | GT2 |
| TC | HRGMv2_2099_67 | HRGMv2_2099_67_13 | 12403 | 12759 | + | 2.A.66.2.16 |
Gene ID: HRGMv2_2099_67_8
Type: CAZyme
Location: 7494 - 8618 (+)
Type: CAZyme
Location: 7494 - 8618 (+)
Gene ID: HRGMv2_2099_67_9
Type:
Location: 8725 - 8973 (+)
Type:
Location: 8725 - 8973 (+)
Gene ID: HRGMv2_2099_67_10
Type: CAZyme
Location: 9022 - 10005 (+)
Type: CAZyme
Location: 9022 - 10005 (+)
Gene ID: HRGMv2_2099_67_11
Type: pfam
Location: 10018 - 11457 (+)
Type: pfam
Location: 10018 - 11457 (+)
Gene ID: HRGMv2_2099_67_12
Type: CAZyme
Location: 11423 - 12406 (+)
Type: CAZyme
Location: 11423 - 12406 (+)
Gene ID: HRGMv2_2099_67_13
Type: TC
Location: 12403 - 12759 (+)
Type: TC
Location: 12403 - 12759 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp934435195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.