dbCAN HGM

Cluster: HRGMv2_2099_CGC15

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2099_62	HRGMv2_2099_62_1	3	632	-	3.A.1.2.25
STP	HRGMv2_2099_62	HRGMv2_2099_62_2	789	1784	-	Peripla_BP_1
TC	HRGMv2_2099_62	HRGMv2_2099_62_3	1777	3588	-	8.A.59.2.1
TF	HRGMv2_2099_62	HRGMv2_2099_62_4	3585	5195	-	HTH_AraC \| HTH_AraC
TC	HRGMv2_2099_62	HRGMv2_2099_62_5	5386	6855	-	4.A.1.1.7
TC	HRGMv2_2099_62	HRGMv2_2099_62_6	6985	7473	-	4.A.1.2.11
pfam	HRGMv2_2099_62	HRGMv2_2099_62_7	7487	8332	-	PRD \| PRD \| CAT_RBD
CAZyme	HRGMv2_2099_62	HRGMv2_2099_62_8	8659	9798	+	CE9

Gene ID: HRGMv2_2099_62_1
Type: TC
Location: 3 - 632 (-)

Gene ID: HRGMv2_2099_62_2
Type: STP
Location: 789 - 1784 (-)

Gene ID: HRGMv2_2099_62_3
Type: TC
Location: 1777 - 3588 (-)

Gene ID: HRGMv2_2099_62_4
Type: TF
Location: 3585 - 5195 (-)

Gene ID: HRGMv2_2099_62_5
Type: TC
Location: 5386 - 6855 (-)

Gene ID: HRGMv2_2099_62_6
Type: TC
Location: 6985 - 7473 (-)

Gene ID: HRGMv2_2099_62_7
Type: pfam
Location: 7487 - 8332 (-)

Gene ID: HRGMv2_2099_62_8
Type: CAZyme
Location: 8659 - 9798 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2099_62_2	vegan > omnivore	2.25467	0.00732
HRGMv2_2099_62_6	vegan > omnivore	16.19801	0.00732
HRGMv2_2099_62_8	vegan > omnivore	2.03452	0.00732
HRGMv2_2099_62_8	vegetarian > omnivore	2.00738	0.00000