Cluster: HRGMv2_2099_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2099
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2099_1 | HRGMv2_2099_1_43 | 45184 | 47172 | - | GH31_1 |
| TF | HRGMv2_2099_1 | HRGMv2_2099_1_44 | 47393 | 48295 | + | HTH_AraC |
| peptidase | HRGMv2_2099_1 | HRGMv2_2099_1_45 | 48426 | 49466 | + | I87.UPW |
| TC | HRGMv2_2099_1 | HRGMv2_2099_1_46 | 50128 | 50898 | + | 2.A.102.3.2 |
Gene ID: HRGMv2_2099_1_43
Type: CAZyme
Location: 45184 - 47172 (-)
Type: CAZyme
Location: 45184 - 47172 (-)
Gene ID: HRGMv2_2099_1_44
Type: TF
Location: 47393 - 48295 (+)
Type: TF
Location: 47393 - 48295 (+)
Gene ID: HRGMv2_2099_1_45
Type: peptidase
Location: 48426 - 49466 (+)
Type: peptidase
Location: 48426 - 49466 (+)
Gene ID: HRGMv2_2099_1_46
Type: TC
Location: 50128 - 50898 (+)
Type: TC
Location: 50128 - 50898 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella sp934435195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.