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Cluster: HRGMv2_2091_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2091_12 HRGMv2_2091_12_50 48752 49897 + 2.A.56.1.3
TF HRGMv2_2091_12 HRGMv2_2091_12_51 50249 52495 + HTH_AraC
pfam HRGMv2_2091_12 HRGMv2_2091_12_52 52545 54743 - BD-FAE
TC HRGMv2_2091_12 HRGMv2_2091_12_53 54873 55916 - 2.A.56.1.6
pfam HRGMv2_2091_12 HRGMv2_2091_12_54 56122 57795 - Lactamase_B | ODP
TC HRGMv2_2091_12 HRGMv2_2091_12_55 58008 59135 + 4.D.2.1.5
pfam HRGMv2_2091_12 HRGMv2_2091_12_56 59166 59822 + CDP-OH_P_transf
pfam HRGMv2_2091_12 HRGMv2_2091_12_57 59792 60610 + PS_Dcarbxylase
CAZyme HRGMv2_2091_12 HRGMv2_2091_12_58 60814 61881 - GT28
Gene ID: HRGMv2_2091_12_50
Type: TC
Location: 48752 - 49897 (+)
Gene ID: HRGMv2_2091_12_51
Type: TF
Location: 50249 - 52495 (+)
Gene ID: HRGMv2_2091_12_52
Type: pfam
Location: 52545 - 54743 (-)
Gene ID: HRGMv2_2091_12_53
Type: TC
Location: 54873 - 55916 (-)
Gene ID: HRGMv2_2091_12_54
Type: pfam
Location: 56122 - 57795 (-)
Gene ID: HRGMv2_2091_12_55
Type: TC
Location: 58008 - 59135 (+)
Gene ID: HRGMv2_2091_12_56
Type: pfam
Location: 59166 - 59822 (+)
Gene ID: HRGMv2_2091_12_57
Type: pfam
Location: 59792 - 60610 (+)
Gene ID: HRGMv2_2091_12_58
Type: CAZyme
Location: 60814 - 61881 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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