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Cluster: HRGMv2_2091_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2091_11 HRGMv2_2091_11_21 23603 24982 + 9.B.18.1.3
CAZyme HRGMv2_2091_11 HRGMv2_2091_11_22 25004 26059 + GT2
CAZyme HRGMv2_2091_11 HRGMv2_2091_11_23 26101 27222 + GT2
CAZyme HRGMv2_2091_11 HRGMv2_2091_11_24 27219 28457 + GT4
CAZyme HRGMv2_2091_11 HRGMv2_2091_11_25 28454 29440 + GT2
CAZyme HRGMv2_2091_11 HRGMv2_2091_11_26 29507 30586 + GT2
CAZyme HRGMv2_2091_11 HRGMv2_2091_11_27 30590 31726 + GT4
CAZyme HRGMv2_2091_11 HRGMv2_2091_11_28 31714 32706 + GT2
pfam HRGMv2_2091_11 HRGMv2_2091_11_29 32721 33725 + Stealth_CR2 | Stealth_CR1 | Stealth_CR3 | Stealth_CR4
CAZyme HRGMv2_2091_11 HRGMv2_2091_11_30 33722 34702 + GT2
Gene ID: HRGMv2_2091_11_21
Type: TC
Location: 23603 - 24982 (+)
Gene ID: HRGMv2_2091_11_22
Type: CAZyme
Location: 25004 - 26059 (+)
Gene ID: HRGMv2_2091_11_23
Type: CAZyme
Location: 26101 - 27222 (+)
Gene ID: HRGMv2_2091_11_24
Type: CAZyme
Location: 27219 - 28457 (+)
Gene ID: HRGMv2_2091_11_25
Type: CAZyme
Location: 28454 - 29440 (+)
Gene ID: HRGMv2_2091_11_26
Type: CAZyme
Location: 29507 - 30586 (+)
Gene ID: HRGMv2_2091_11_27
Type: CAZyme
Location: 30590 - 31726 (+)
Gene ID: HRGMv2_2091_11_28
Type: CAZyme
Location: 31714 - 32706 (+)
Gene ID: HRGMv2_2091_11_29
Type: pfam
Location: 32721 - 33725 (+)
Gene ID: HRGMv2_2091_11_30
Type: CAZyme
Location: 33722 - 34702 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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