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Cluster: HRGMv2_2091_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2091_53 HRGMv2_2091_53_1 153 2144 - GH31_4
STP HRGMv2_2091_53 HRGMv2_2091_53_2 2251 3651 - SBP_bac_1
peptidase HRGMv2_2091_53 HRGMv2_2091_53_3 3681 4508 - S09.UPW
CAZyme HRGMv2_2091_53 HRGMv2_2091_53_4 4778 6760 + GH31_4
STP HRGMv2_2091_53 HRGMv2_2091_53_5 6894 8291 + SBP_bac_1
TC HRGMv2_2091_53 HRGMv2_2091_53_6 8329 9234 + 3.A.1.1.4
TC HRGMv2_2091_53 HRGMv2_2091_53_7 9250 10083 + 3.A.1.1.11
TC HRGMv2_2091_53 HRGMv2_2091_53_8 10162 11118 + 3.A.1.132.1
TC HRGMv2_2091_53 HRGMv2_2091_53_9 11115 11822 + 3.A.1.132.3
pfam HRGMv2_2091_53 HRGMv2_2091_53_10 11847 13274 + ABC_transp_aux | DUF7088
pfam HRGMv2_2091_53 HRGMv2_2091_53_11 13290 14756 + DUF4340 | DUF4340
TC HRGMv2_2091_53 HRGMv2_2091_53_12 14780 15541 - 9.B.28.1.8
TC HRGMv2_2091_53 HRGMv2_2091_53_13 15739 16848 + 3.A.1.1.26
TF HRGMv2_2091_53 HRGMv2_2091_53_14 17056 17928 + 0037176
pfam HRGMv2_2091_53 HRGMv2_2091_53_15 17918 18433 + DUF6106
TC HRGMv2_2091_53 HRGMv2_2091_53_16 18562 19497 - 8.A.5.1.7
pfam HRGMv2_2091_53 HRGMv2_2091_53_17 19551 20165 - Flavodoxin_2 | FMN_red
STP HRGMv2_2091_53 HRGMv2_2091_53_18 20244 20783 - Nitroreductase | Nitroreductase
TC HRGMv2_2091_53 HRGMv2_2091_53_19 21064 22419 + 2.A.22.5.3
Gene ID: HRGMv2_2091_53_1
Type: CAZyme
Location: 153 - 2144 (-)
Gene ID: HRGMv2_2091_53_2
Type: STP
Location: 2251 - 3651 (-)
Gene ID: HRGMv2_2091_53_3
Type: peptidase
Location: 3681 - 4508 (-)
Gene ID: HRGMv2_2091_53_4
Type: CAZyme
Location: 4778 - 6760 (+)
Gene ID: HRGMv2_2091_53_5
Type: STP
Location: 6894 - 8291 (+)
Gene ID: HRGMv2_2091_53_6
Type: TC
Location: 8329 - 9234 (+)
Gene ID: HRGMv2_2091_53_7
Type: TC
Location: 9250 - 10083 (+)
Gene ID: HRGMv2_2091_53_8
Type: TC
Location: 10162 - 11118 (+)
Gene ID: HRGMv2_2091_53_9
Type: TC
Location: 11115 - 11822 (+)
Gene ID: HRGMv2_2091_53_10
Type: pfam
Location: 11847 - 13274 (+)
Gene ID: HRGMv2_2091_53_11
Type: pfam
Location: 13290 - 14756 (+)
Gene ID: HRGMv2_2091_53_12
Type: TC
Location: 14780 - 15541 (-)
Gene ID: HRGMv2_2091_53_13
Type: TC
Location: 15739 - 16848 (+)
Gene ID: HRGMv2_2091_53_14
Type: TF
Location: 17056 - 17928 (+)
Gene ID: HRGMv2_2091_53_15
Type: pfam
Location: 17918 - 18433 (+)
Gene ID: HRGMv2_2091_53_16
Type: TC
Location: 18562 - 19497 (-)
Gene ID: HRGMv2_2091_53_17
Type: pfam
Location: 19551 - 20165 (-)
Gene ID: HRGMv2_2091_53_18
Type: STP
Location: 20244 - 20783 (-)
Gene ID: HRGMv2_2091_53_19
Type: TC
Location: 21064 - 22419 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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