Cluster: HRGMv2_2083_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2083
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2083_6 | HRGMv2_2083_6_73 | 90548 | 91447 | - | 3.A.1.126.1 |
| TF | HRGMv2_2083_6 | HRGMv2_2083_6_74 | 91444 | 91815 | - | GntR |
| pfam | HRGMv2_2083_6 | HRGMv2_2083_6_75 | 91942 | 92403 | - | Cu_amine_oxidN1 |
| CAZyme | HRGMv2_2083_6 | HRGMv2_2083_6_76 | 92419 | 93483 | - | GT28 |
| pfam | HRGMv2_2083_6 | HRGMv2_2083_6_77 | 93696 | 94538 | + | DAP_epimerase | DAP_epimerase |
| pfam | HRGMv2_2083_6 | HRGMv2_2083_6_78 | 94548 | 95039 | + | PAP2 | PAP2_3 |
| CAZyme | HRGMv2_2083_6 | HRGMv2_2083_6_79 | 95497 | 97971 | + | CBM77 | PL9_1 |
Gene ID: HRGMv2_2083_6_73
Type: TC
Location: 90548 - 91447 (-)
Type: TC
Location: 90548 - 91447 (-)
Gene ID: HRGMv2_2083_6_74
Type: TF
Location: 91444 - 91815 (-)
Type: TF
Location: 91444 - 91815 (-)
Gene ID: HRGMv2_2083_6_75
Type: pfam
Location: 91942 - 92403 (-)
Type: pfam
Location: 91942 - 92403 (-)
Gene ID: HRGMv2_2083_6_76
Type: CAZyme
Location: 92419 - 93483 (-)
Type: CAZyme
Location: 92419 - 93483 (-)
Gene ID: HRGMv2_2083_6_77
Type: pfam
Location: 93696 - 94538 (+)
Type: pfam
Location: 93696 - 94538 (+)
Gene ID: HRGMv2_2083_6_78
Type: pfam
Location: 94548 - 95039 (+)
Type: pfam
Location: 94548 - 95039 (+)
Gene ID: HRGMv2_2083_6_79
Type: CAZyme
Location: 95497 - 97971 (+)
Type: CAZyme
Location: 95497 - 97971 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
CAG-274
Genus
CAG-274
Species
CAG-274 sp900545305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.