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Cluster: HRGMv2_2083_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2083_37 HRGMv2_2083_37_73 78232 79254 + 2.A.9.3.6
pfam HRGMv2_2083_37 HRGMv2_2083_37_74 79256 80167 + R3H | KH_KhpA-B | Jag_N
pfam HRGMv2_2083_37 HRGMv2_2083_37_75 80246 81628 + Ras | MMR_HSR1 | FeoB_N | AIG1 | TrmE_N | MnmE_helical
TC HRGMv2_2083_37 HRGMv2_2083_37_76 81660 83534 + 1.C.39.4.5
pfam HRGMv2_2083_37 HRGMv2_2083_37_77 83542 84246 + GidB
pfam HRGMv2_2083_37 HRGMv2_2083_37_78 84257 84679 + Acetyltransf_1 | FR47 | Acetyltransf_7 | Acetyltransf_10
CAZyme HRGMv2_2083_37 HRGMv2_2083_37_79 84755 88666 + PL9_1
TC HRGMv2_2083_37 HRGMv2_2083_37_80 88814 90091 + 9.B.141.1.1
TC HRGMv2_2083_37 HRGMv2_2083_37_81 90104 90733 + 3.A.1.134.10
Gene ID: HRGMv2_2083_37_73
Type: TC
Location: 78232 - 79254 (+)
Gene ID: HRGMv2_2083_37_74
Type: pfam
Location: 79256 - 80167 (+)
Gene ID: HRGMv2_2083_37_75
Type: pfam
Location: 80246 - 81628 (+)
Gene ID: HRGMv2_2083_37_76
Type: TC
Location: 81660 - 83534 (+)
Gene ID: HRGMv2_2083_37_77
Type: pfam
Location: 83542 - 84246 (+)
Gene ID: HRGMv2_2083_37_78
Type: pfam
Location: 84257 - 84679 (+)
Gene ID: HRGMv2_2083_37_79
Type: CAZyme
Location: 84755 - 88666 (+)
Gene ID: HRGMv2_2083_37_80
Type: TC
Location: 88814 - 90091 (+)
Gene ID: HRGMv2_2083_37_81
Type: TC
Location: 90104 - 90733 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
CAG-274
→
Genus
CAG-274
→
Species
CAG-274 sp900545305

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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