Cluster: HRGMv2_2083_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2083
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2083_31 | HRGMv2_2083_31_28 | 25523 | 26695 | + | GT4 |
| pfam | HRGMv2_2083_31 | HRGMv2_2083_31_29 | 26710 | 27309 | + | VTT_dom |
| CAZyme | HRGMv2_2083_31 | HRGMv2_2083_31_30 | 27321 | 28310 | + | GT4 |
| TC | HRGMv2_2083_31 | HRGMv2_2083_31_31 | 28502 | 30865 | - | 9.A.8.1.6 |
| NULL(UNKNOWN) | HRGMv2_2083_31 | HRGMv2_2083_31_32 | 31045 | 31521 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2083_31 | HRGMv2_2083_31_33 | 31611 | 32258 | - | TetR_N |
| TC | HRGMv2_2083_31 | HRGMv2_2083_31_34 | 32399 | 33319 | - | 8.A.21.2.2 |
Gene ID: HRGMv2_2083_31_28
Type: CAZyme
Location: 25523 - 26695 (+)
Type: CAZyme
Location: 25523 - 26695 (+)
Gene ID: HRGMv2_2083_31_29
Type: pfam
Location: 26710 - 27309 (+)
Type: pfam
Location: 26710 - 27309 (+)
Gene ID: HRGMv2_2083_31_30
Type: CAZyme
Location: 27321 - 28310 (+)
Type: CAZyme
Location: 27321 - 28310 (+)
Gene ID: HRGMv2_2083_31_31
Type: TC
Location: 28502 - 30865 (-)
Type: TC
Location: 28502 - 30865 (-)
Gene ID: HRGMv2_2083_31_32
Type:
Location: 31045 - 31521 (-)
Type:
Location: 31045 - 31521 (-)
Gene ID: HRGMv2_2083_31_33
Type: STP
Location: 31611 - 32258 (-)
Type: STP
Location: 31611 - 32258 (-)
Gene ID: HRGMv2_2083_31_34
Type: TC
Location: 32399 - 33319 (-)
Type: TC
Location: 32399 - 33319 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
CAG-274
Genus
CAG-274
Species
CAG-274 sp900545305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.