Cluster: HRGMv2_2083_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2083
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2083_20 | HRGMv2_2083_20_26 | 34707 | 36059 | - | GH28 |
| pfam | HRGMv2_2083_20 | HRGMv2_2083_20_27 | 36232 | 37137 | + | HTS |
| STP | HRGMv2_2083_20 | HRGMv2_2083_20_28 | 37203 | 37790 | - | TetR_N |
| CAZyme | HRGMv2_2083_20 | HRGMv2_2083_20_29 | 38005 | 40407 | + | PL1 |
| pfam | HRGMv2_2083_20 | HRGMv2_2083_20_30 | 40677 | 42041 | + | HlyD_3 | Biotin_lipoyl_2 |
| TC | HRGMv2_2083_20 | HRGMv2_2083_20_31 | 42045 | 45119 | + | 2.A.6.2.38 |
Gene ID: HRGMv2_2083_20_26
Type: CAZyme
Location: 34707 - 36059 (-)
Type: CAZyme
Location: 34707 - 36059 (-)
Gene ID: HRGMv2_2083_20_27
Type: pfam
Location: 36232 - 37137 (+)
Type: pfam
Location: 36232 - 37137 (+)
Gene ID: HRGMv2_2083_20_28
Type: STP
Location: 37203 - 37790 (-)
Type: STP
Location: 37203 - 37790 (-)
Gene ID: HRGMv2_2083_20_29
Type: CAZyme
Location: 38005 - 40407 (+)
Type: CAZyme
Location: 38005 - 40407 (+)
Gene ID: HRGMv2_2083_20_30
Type: pfam
Location: 40677 - 42041 (+)
Type: pfam
Location: 40677 - 42041 (+)
Gene ID: HRGMv2_2083_20_31
Type: TC
Location: 42045 - 45119 (+)
Type: TC
Location: 42045 - 45119 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
CAG-274
Genus
CAG-274
Species
CAG-274 sp900545305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.