Cluster: HRGMv2_2076_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2076
- CGC Family ID: CGCFAM_02675
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2076_7 | HRGMv2_2076_7_23 | 27700 | 29460 | - | 3.A.1.106.2 |
| TC | HRGMv2_2076_7 | HRGMv2_2076_7_24 | 29501 | 31108 | - | 9.B.34.1.3 |
| TC | HRGMv2_2076_7 | HRGMv2_2076_7_25 | 31279 | 32346 | + | 9.B.97.4.1 |
| CAZyme | HRGMv2_2076_7 | HRGMv2_2076_7_26 | 32797 | 34122 | - | GH3 |
| TC | HRGMv2_2076_7 | HRGMv2_2076_7_27 | 34912 | 36657 | - | 3.A.1.135.5 |
| TC | HRGMv2_2076_7 | HRGMv2_2076_7_28 | 36657 | 38405 | - | 3.A.1.135.5 |
Gene ID: HRGMv2_2076_7_23
Type: TC
Location: 27700 - 29460 (-)
Type: TC
Location: 27700 - 29460 (-)
Gene ID: HRGMv2_2076_7_24
Type: TC
Location: 29501 - 31108 (-)
Type: TC
Location: 29501 - 31108 (-)
Gene ID: HRGMv2_2076_7_25
Type: TC
Location: 31279 - 32346 (+)
Type: TC
Location: 31279 - 32346 (+)
Gene ID: HRGMv2_2076_7_26
Type: CAZyme
Location: 32797 - 34122 (-)
Type: CAZyme
Location: 32797 - 34122 (-)
Gene ID: HRGMv2_2076_7_27
Type: TC
Location: 34912 - 36657 (-)
Type: TC
Location: 34912 - 36657 (-)
Gene ID: HRGMv2_2076_7_28
Type: TC
Location: 36657 - 38405 (-)
Type: TC
Location: 36657 - 38405 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.