Cluster: HRGMv2_2076_CGC40
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2076
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2076_78 | HRGMv2_2076_78_1 | 187 | 2856 | - | GT51 |
| pfam | HRGMv2_2076_78 | HRGMv2_2076_78_2 | 3010 | 3657 | + | UPF0029 | DUF1949 |
| TC | HRGMv2_2076_78 | HRGMv2_2076_78_3 | 3811 | 5160 | + | 1.A.26.1.2 |
| NULL(UNKNOWN) | HRGMv2_2076_78 | HRGMv2_2076_78_4 | 5376 | 6044 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2076_78 | HRGMv2_2076_78_5 | 6196 | 7155 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2076_78 | HRGMv2_2076_78_6 | 7278 | 8945 | + | 9.B.34.1.3 |
Gene ID: HRGMv2_2076_78_1
Type: CAZyme
Location: 187 - 2856 (-)
Type: CAZyme
Location: 187 - 2856 (-)
Gene ID: HRGMv2_2076_78_2
Type: pfam
Location: 3010 - 3657 (+)
Type: pfam
Location: 3010 - 3657 (+)
Gene ID: HRGMv2_2076_78_3
Type: TC
Location: 3811 - 5160 (+)
Type: TC
Location: 3811 - 5160 (+)
Gene ID: HRGMv2_2076_78_4
Type:
Location: 5376 - 6044 (+)
Type:
Location: 5376 - 6044 (+)
Gene ID: HRGMv2_2076_78_5
Type:
Location: 6196 - 7155 (+)
Type:
Location: 6196 - 7155 (+)
Gene ID: HRGMv2_2076_78_6
Type: TC
Location: 7278 - 8945 (+)
Type: TC
Location: 7278 - 8945 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.