Cluster: HRGMv2_2076_CGC39
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2076
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2076_71 | HRGMv2_2076_71_2 | 1533 | 2498 | + | 9.B.146.1.3 |
| pfam | HRGMv2_2076_71 | HRGMv2_2076_71_3 | 2604 | 3104 | + | GreA_GreB | GreA_GreB_N |
| peptidase | HRGMv2_2076_71 | HRGMv2_2076_71_4 | 3243 | 4778 | + | G05.UPW |
| CAZyme | HRGMv2_2076_71 | HRGMv2_2076_71_5 | 5018 | 5821 | + | GT2 |
Gene ID: HRGMv2_2076_71_2
Type: TC
Location: 1533 - 2498 (+)
Type: TC
Location: 1533 - 2498 (+)
Gene ID: HRGMv2_2076_71_3
Type: pfam
Location: 2604 - 3104 (+)
Type: pfam
Location: 2604 - 3104 (+)
Gene ID: HRGMv2_2076_71_4
Type: peptidase
Location: 3243 - 4778 (+)
Type: peptidase
Location: 3243 - 4778 (+)
Gene ID: HRGMv2_2076_71_5
Type: CAZyme
Location: 5018 - 5821 (+)
Type: CAZyme
Location: 5018 - 5821 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.