dbCAN Logo

Cluster: HRGMv2_2076_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2076_60 HRGMv2_2076_60_3 2103 5321 + GT39
CAZyme HRGMv2_2076_60 HRGMv2_2076_60_4 5336 8011 + GT76
NULL(UNKNOWN) HRGMv2_2076_60 HRGMv2_2076_60_5 8018 8794 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2076_60 HRGMv2_2076_60_6 9103 11028 - 3.A.1.135.5
TC HRGMv2_2076_60 HRGMv2_2076_60_7 11028 12782 - 3.A.1.135.5
TF HRGMv2_2076_60 HRGMv2_2076_60_8 13002 13490 - MarR
pfam HRGMv2_2076_60 HRGMv2_2076_60_9 13693 14754 - Fe-ADH | Fe-ADH_2
TC HRGMv2_2076_60 HRGMv2_2076_60_10 14945 15454 - 9.A.11.1.1
Gene ID: HRGMv2_2076_60_3
Type: CAZyme
Location: 2103 - 5321 (+)
Gene ID: HRGMv2_2076_60_4
Type: CAZyme
Location: 5336 - 8011 (+)
Gene ID: HRGMv2_2076_60_5
Type:
Location: 8018 - 8794 (-)
Gene ID: HRGMv2_2076_60_6
Type: TC
Location: 9103 - 11028 (-)
Gene ID: HRGMv2_2076_60_7
Type: TC
Location: 11028 - 12782 (-)
Gene ID: HRGMv2_2076_60_8
Type: TF
Location: 13002 - 13490 (-)
Gene ID: HRGMv2_2076_60_9
Type: pfam
Location: 13693 - 14754 (-)
Gene ID: HRGMv2_2076_60_10
Type: TC
Location: 14945 - 15454 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Acetatifactor
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List