Cluster: HRGMv2_2076_CGC33
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2076
- CGC Family ID: CGCFAM_03387
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2076_44 | HRGMv2_2076_44_15 | 11969 | 13288 | - | 2.A.66.1.10 |
| TF | HRGMv2_2076_44 | HRGMv2_2076_44_16 | 13285 | 14310 | - | LacI |
| CAZyme | HRGMv2_2076_44 | HRGMv2_2076_44_17 | 14642 | 16180 | - | GH13_44 |
| pfam | HRGMv2_2076_44 | HRGMv2_2076_44_18 | 16437 | 17186 | + | FRG |
| TC | HRGMv2_2076_44 | HRGMv2_2076_44_19 | 17440 | 18546 | + | 3.A.1.1.38 |
| TC | HRGMv2_2076_44 | HRGMv2_2076_44_20 | 18609 | 19502 | + | 3.A.1.1.34 |
| TC | HRGMv2_2076_44 | HRGMv2_2076_44_21 | 19520 | 20398 | + | 3.A.1.1.20 |
Gene ID: HRGMv2_2076_44_15
Type: TC
Location: 11969 - 13288 (-)
Type: TC
Location: 11969 - 13288 (-)
Gene ID: HRGMv2_2076_44_16
Type: TF
Location: 13285 - 14310 (-)
Type: TF
Location: 13285 - 14310 (-)
Gene ID: HRGMv2_2076_44_17
Type: CAZyme
Location: 14642 - 16180 (-)
Type: CAZyme
Location: 14642 - 16180 (-)
Gene ID: HRGMv2_2076_44_18
Type: pfam
Location: 16437 - 17186 (+)
Type: pfam
Location: 16437 - 17186 (+)
Gene ID: HRGMv2_2076_44_19
Type: TC
Location: 17440 - 18546 (+)
Type: TC
Location: 17440 - 18546 (+)
Gene ID: HRGMv2_2076_44_20
Type: TC
Location: 18609 - 19502 (+)
Type: TC
Location: 18609 - 19502 (+)
Gene ID: HRGMv2_2076_44_21
Type: TC
Location: 19520 - 20398 (+)
Type: TC
Location: 19520 - 20398 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.