Cluster: HRGMv2_2076_CGC32
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate: host glycan
- Genome ID: HRGMv2_2076
- CGC Family ID: CGCFAM_00312
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2076_42 | HRGMv2_2076_42_12 | 10242 | 12401 | + | GH112 |
| TC | HRGMv2_2076_42 | HRGMv2_2076_42_13 | 12472 | 13827 | + | 3.A.1.1.4 |
| TC | HRGMv2_2076_42 | HRGMv2_2076_42_14 | 13901 | 14779 | + | 3.A.1.1.4 |
| TC | HRGMv2_2076_42 | HRGMv2_2076_42_15 | 14772 | 15578 | + | 3.A.1.1.4 |
| NULL(UNKNOWN) | HRGMv2_2076_42 | HRGMv2_2076_42_16 | 15578 | 16051 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2076_42 | HRGMv2_2076_42_17 | 16002 | 17297 | + | GH136 |
| TC | HRGMv2_2076_42 | HRGMv2_2076_42_18 | 17506 | 18498 | + | 3.A.1.11.1 |
| TC | HRGMv2_2076_42 | HRGMv2_2076_42_19 | 18476 | 19351 | + | 3.A.1.11.1 |
| TC | HRGMv2_2076_42 | HRGMv2_2076_42_20 | 19354 | 20154 | + | 3.A.1.11.2 |
| TC | HRGMv2_2076_42 | HRGMv2_2076_42_21 | 20249 | 21298 | + | 3.A.1.11.1 |
Gene ID: HRGMv2_2076_42_12
Type: CAZyme
Location: 10242 - 12401 (+)
Type: CAZyme
Location: 10242 - 12401 (+)
Gene ID: HRGMv2_2076_42_13
Type: TC
Location: 12472 - 13827 (+)
Type: TC
Location: 12472 - 13827 (+)
Gene ID: HRGMv2_2076_42_14
Type: TC
Location: 13901 - 14779 (+)
Type: TC
Location: 13901 - 14779 (+)
Gene ID: HRGMv2_2076_42_15
Type: TC
Location: 14772 - 15578 (+)
Type: TC
Location: 14772 - 15578 (+)
Gene ID: HRGMv2_2076_42_16
Type:
Location: 15578 - 16051 (+)
Type:
Location: 15578 - 16051 (+)
Gene ID: HRGMv2_2076_42_17
Type: CAZyme
Location: 16002 - 17297 (+)
Type: CAZyme
Location: 16002 - 17297 (+)
Gene ID: HRGMv2_2076_42_18
Type: TC
Location: 17506 - 18498 (+)
Type: TC
Location: 17506 - 18498 (+)
Gene ID: HRGMv2_2076_42_19
Type: TC
Location: 18476 - 19351 (+)
Type: TC
Location: 18476 - 19351 (+)
Gene ID: HRGMv2_2076_42_20
Type: TC
Location: 19354 - 20154 (+)
Type: TC
Location: 19354 - 20154 (+)
Gene ID: HRGMv2_2076_42_21
Type: TC
Location: 20249 - 21298 (+)
Type: TC
Location: 20249 - 21298 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.